1. ClustIRR::BLOSUM62
    BLOSUM62 matrix
    csv| json| rda| rds
    matrix|25 x 25
  2. ClustIRR::CDR3ab
    Datasets 'CDR3ab' and 'D1' with TCRalphabeta mock repertoires
    csv| xlsx| json| ndjson| rda| rds
    data.frame|10000 x 6
  3. ClustIRR::D1
    Datasets 'CDR3ab' and 'D1' with TCRalphabeta mock repertoires
    json| rda| rds
    list
  4. ClustIRR::mcpas
    CDR3 sequences and their matching epitopes obtained from McPAS-TCR
    csv| xlsx| json| ndjson| rda| rds
    data.frame|35287 x 10
  5. ClustIRR::tcr3d
    CDR3 sequences and their matching epitopes obtained from TCR3d
    csv| xlsx| json| ndjson| rda| rds
    data.frame|273 x 10
  6. ClustIRR::vdjdb
    CDR3 sequences and their matching epitopes obtained from VDJdb
    csv| xlsx| json| ndjson| rda| rds
    data.frame|81894 x 10
  7. IgGeneUsage::CDR3_Epitopes
    Net charge usage in CDR3 sequences of T-cell receptor repertoires disturbed by Influenza-A and CMV
    csv| xlsx| json| ndjson| rda| rds
    data.frame|143 x 4
  8. IgGeneUsage::IGHV_HCV
    IGHV gene usage in HCV+ and healthy individuals
    csv| xlsx| json| ndjson| rda| rds
    data.frame|2001 x 4
  9. IgGeneUsage::Ig
    IGHV gene family usage in vaccine-challenged B-cell repertoires
    csv| xlsx| json| ndjson| rda| rds
    data.frame|48 x 4
  10. IgGeneUsage::Ig_SE
    IGHV gene family usage in vaccine-challenged B-cell repertoires (SummarizedExperiment object)
    rda| rds
    SummarizedExperiment
  11. IgGeneUsage::d_zibb_1
    Simulated Ig gene usage data
    csv| xlsx| json| ndjson| rda| rds
    data.frame|75 x 4
  12. IgGeneUsage::d_zibb_2
    Simulated Ig gene usage data
    csv| xlsx| json| ndjson| rda| rds
    data.frame|225 x 5
  13. IgGeneUsage::d_zibb_3
    Simulated Ig gene usage data
    csv| xlsx| json| ndjson| rda| rds
    data.frame|120 x 4
  14. IgGeneUsage::d_zibb_4
    Simulated Ig gene usage data
    csv| xlsx| json| ndjson| rda| rds
    data.frame|320 x 5
  15. IgGeneUsage::d_zibb_5
    Simulated Ig gene usage data
    csv| xlsx| json| ndjson| rda| rds
    data.frame|180 x 4
  16. IgGeneUsage::d_zibb_6
    Simulated Ig gene usage data
    csv| xlsx| json| ndjson| rda| rds
    data.frame|1080 x 5
  17. scBubbletree::d_500
    Dataset: 500 PBMCs
    json| rda| rds
    list
  18. scBubbletree::d_ccl
    Dataset: scRNA-seq data of 3,918 cells from 5 adenocarcinoma cell lines
    json| rda| rds
    list